Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UBE2D4Q9Y2X8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 YBX1P10-201ENST00000444752 975 ntBASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 AP006587.1-201ENST00000534129 1502 ntBASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 PCDHB18P-201ENST00000524813 2368 ntBASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.28□□□□□ -0.28
UBE2D4Q9Y2X8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.27□□□□□ -0.28
UBE2D4Q9Y2X8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
UBE2D4Q9Y2X8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D4Q9Y2X8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.27□□□□□ -0.28
UBE2D4Q9Y2X8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D4Q9Y2X8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
UBE2D4Q9Y2X8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UBE2D4Q9Y2X8 BCL2-203ENST00000589955 5011 ntBASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 AC005181.1-201ENST00000604782 1256 ntBASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 AC087623.3-201ENST00000607047 1098 ntBASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBE2D4Q9Y2X8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBE2D4Q9Y2X8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms