Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 AL645929.1-201ENST00000420084 975 ntBASIC24.92■■□□□ 1.58
SPG7Q9UQ90 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 AC024243.1-201ENST00000609234 778 ntBASIC24.92■■□□□ 1.58
SPG7Q9UQ90 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
SPG7Q9UQ90 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24.91■■□□□ 1.58
SPG7Q9UQ90 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.91■■□□□ 1.58
SPG7Q9UQ90 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 AC036111.1-201ENST00000533973 1582 ntBASIC24.91■■□□□ 1.58
SPG7Q9UQ90 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SPG7Q9UQ90 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 TPM4P1-201ENST00000436100 807 ntBASIC24.9■■□□□ 1.58
SPG7Q9UQ90 NPAP1P7-201ENST00000613027 823 ntBASIC24.9■■□□□ 1.58
SPG7Q9UQ90 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SPG7Q9UQ90 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 MIR3180-5-201ENST00000583743 153 ntBASIC24.89■■□□□ 1.58
SPG7Q9UQ90 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.89■■□□□ 1.58
SPG7Q9UQ90 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.89■■□□□ 1.57
SPG7Q9UQ90 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
SPG7Q9UQ90 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 MCCD1P1-208ENST00000445732 328 ntBASIC24.88■■□□□ 1.57
SPG7Q9UQ90 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.88■■□□□ 1.57
SPG7Q9UQ90 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.87■■□□□ 1.57
SPG7Q9UQ90 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms