Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 Z98044.1-201ENST00000632503 1764 ntBASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 KRT8P8-201ENST00000434750 1448 ntBASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 AC090164.3-201ENST00000610780 2143 ntBASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NIPSNAP3AQ9UFN0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AC022517.1-201ENST00000592429 346 ntBASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 RAP2CP1-201ENST00000605103 478 ntBASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AC080038.1-201ENST00000611274 1154 ntBASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 MIR5787-201ENST00000611784 55 ntBASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 AC093525.10-201ENST00000625130 1569 ntBASIC18.21■□□□□ 0.51
NIPSNAP3AQ9UFN0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
NIPSNAP3AQ9UFN0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 YBX1P10-201ENST00000444752 975 ntBASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 AL050303.2-201ENST00000619798 666 ntBASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 AC073111.5-205ENST00000641717 521 ntBASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 AC005082.1-201ENST00000413042 2259 ntBASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NIPSNAP3AQ9UFN0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NIPSNAP3AQ9UFN0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NIPSNAP3AQ9UFN0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms