Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 NTF6B-201ENST00000591913 560 ntBASIC17.5■□□□□ 0.39
LRFN1Q9P244 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRFN1Q9P244 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN1Q9P244 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 AC117947.1-201ENST00000427448 529 ntBASIC17.49■□□□□ 0.39
LRFN1Q9P244 TSPY21P-201ENST00000433481 731 ntBASIC17.49■□□□□ 0.39
LRFN1Q9P244 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 LINC01238-205ENST00000567549 1107 ntBASIC17.49■□□□□ 0.39
LRFN1Q9P244 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 AC139887.4-201ENST00000607877 719 ntBASIC17.49■□□□□ 0.39
LRFN1Q9P244 AC141257.4-201ENST00000634557 245 ntBASIC17.49■□□□□ 0.39
LRFN1Q9P244 AC136944.6-201ENST00000634818 245 ntBASIC17.49■□□□□ 0.39
LRFN1Q9P244 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.49■□□□□ 0.39
LRFN1Q9P244 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN1Q9P244 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 TSPY23P-201ENST00000440136 739 ntBASIC17.48■□□□□ 0.39
LRFN1Q9P244 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 COX11P1-201ENST00000489116 835 ntBASIC17.48■□□□□ 0.39
LRFN1Q9P244 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 WWOX-216ENST00000569818 525 ntBASIC17.48■□□□□ 0.39
LRFN1Q9P244 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.48■□□□□ 0.39
LRFN1Q9P244 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN1Q9P244 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms