Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 AL023284.2-201ENST00000405850 579 ntBASIC21.59■■□□□ 1.05
COL20A1Q9P218 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 AL359075.1-203ENST00000462729 1002 ntBASIC21.58■■□□□ 1.05
COL20A1Q9P218 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COL20A1Q9P218 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.58■■□□□ 1.05
COL20A1Q9P218 AC140113.3-201ENST00000605663 199 ntBASIC21.58■■□□□ 1.05
COL20A1Q9P218 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL20A1Q9P218 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL20A1Q9P218 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL20A1Q9P218 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL20A1Q9P218 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
COL20A1Q9P218 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 AC092647.4-201ENST00000457211 535 ntBASIC21.57■■□□□ 1.04
COL20A1Q9P218 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 GCSHP2-201ENST00000560971 527 ntBASIC21.57■■□□□ 1.04
COL20A1Q9P218 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 AL031432.5-201ENST00000641059 760 ntBASIC21.57■■□□□ 1.04
COL20A1Q9P218 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL20A1Q9P218 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL20A1Q9P218 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 KRT8P3-201ENST00000519669 1449 ntBASIC21.56■■□□□ 1.04
COL20A1Q9P218 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 LINC01238-205ENST00000567549 1107 ntBASIC21.56■■□□□ 1.04
COL20A1Q9P218 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.56■■□□□ 1.04
COL20A1Q9P218 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL20A1Q9P218 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms