Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 UBE2SP1-201ENST00000450587 669 ntBASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALCOCO1Q9P1Z2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 BCL2-203ENST00000589955 5011 ntBASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 HLA-G-202ENST00000376815 851 ntBASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 HLA-G-203ENST00000376818 1127 ntBASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALCOCO1Q9P1Z2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 C1QBPP2-201ENST00000528754 825 ntBASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 AC012313.1-201ENST00000593393 3059 ntBASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 FAM197Y4-202ENST00000622692 608 ntBASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.74■□□□□ 0.91
CALCOCO1Q9P1Z2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 PRORSD1P-202ENST00000563365 2154 ntBASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 AL390719.1-204ENST00000412397 1219 ntBASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CALCOCO1Q9P1Z2 KRT17P3-201ENST00000420566 1262 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms