Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 AC133637.1-201ENST00000624115 1537 ntBASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SMCO4Q9NRQ5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SMCO4Q9NRQ5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 AC068418.2-201ENST00000577309 3703 ntBASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 SLC25A6P5-201ENST00000435663 894 ntBASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 MIR6722-201ENST00000617286 78 ntBASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SMCO4Q9NRQ5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMCO4Q9NRQ5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms