Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
SDHAF3Q9NRP4 AC093484.2-201ENST00000580996 2166 ntBASIC17.52■□□□□ 0.39
SDHAF3Q9NRP4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.52■□□□□ 0.39
SDHAF3Q9NRP4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 AL596275.1-201ENST00000423464 877 ntBASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 AP000692.2-201ENST00000608391 879 ntBASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SDHAF3Q9NRP4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
SDHAF3Q9NRP4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 SLC25A1P4-201ENST00000567977 778 ntBASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.49■□□□□ 0.39
SDHAF3Q9NRP4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SDHAF3Q9NRP4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SDHAF3Q9NRP4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SDHAF3Q9NRP4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms