Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 KRT18P38-201ENST00000449496 1282 ntBASIC19.72■□□□□ 0.75
HPS4Q9NQG7 PRSS44-201ENST00000515154 1146 ntBASIC19.72■□□□□ 0.75
HPS4Q9NQG7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AC140113.3-201ENST00000605663 199 ntBASIC19.72■□□□□ 0.75
HPS4Q9NQG7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AL121956.5-201ENST00000625261 221 ntBASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 AP000550.4-202ENST00000639755 178 ntBASIC19.72■□□□□ 0.75
HPS4Q9NQG7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HPS4Q9NQG7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.71■□□□□ 0.75
HPS4Q9NQG7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 PCED1CP-201ENST00000419887 785 ntBASIC19.7■□□□□ 0.74
HPS4Q9NQG7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 AC008622.2-201ENST00000617006 1229 ntBASIC19.7■□□□□ 0.74
HPS4Q9NQG7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HPS4Q9NQG7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.69■□□□□ 0.74
HPS4Q9NQG7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 AL671277.2-201ENST00000458060 996 ntBASIC19.69■□□□□ 0.74
HPS4Q9NQG7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.69■□□□□ 0.74
HPS4Q9NQG7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms