Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NLRC4Q9NPP4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 MTDHP1-201ENST00000605323 784 ntBASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 AC069544.1-201ENST00000609399 999 ntBASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 HLA-A-209ENST00000638375 975 ntBASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NLRC4Q9NPP4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 AL031598.1-201ENST00000561511 1773 ntBASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NLRC4Q9NPP4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
NLRC4Q9NPP4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms