Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 AC005082.1-201ENST00000413042 2259 ntBASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 AC004980.1-204ENST00000429707 299 ntBASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 HCG4P8-203ENST00000443049 980 ntBASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 COX11P1-201ENST00000489116 835 ntBASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE5Q9HCH3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 AP006587.1-201ENST00000534129 1502 ntBASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 AL121956.5-201ENST00000625261 221 ntBASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE5Q9HCH3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 AC131212.4-201ENST00000623606 975 ntBASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 AC116562.4-202ENST00000641738 218 ntBASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE5Q9HCH3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE5Q9HCH3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 PTBP1P-201ENST00000554374 1601 ntBASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 AC011558.1-201ENST00000623459 338 ntBASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 KRT8P20-201ENST00000423953 1409 ntBASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE5Q9HCH3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE5Q9HCH3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms