Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SCAF1Q9H7N4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 AC090142.2-201ENST00000483263 416 ntBASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 AC139887.4-201ENST00000607877 719 ntBASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCAF1Q9H7N4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 KRT18P16-201ENST00000510337 1294 ntBASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 AL121829.2-201ENST00000620908 328 ntBASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC28.35■■■□□ 2.13
SCAF1Q9H7N4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 AC018470.1-201ENST00000624790 3129 ntBASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 AC091390.4-202ENST00000476426 537 ntBASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SCAF1Q9H7N4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 RNF152P1-201ENST00000397754 604 ntBASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 FAM207BP-201ENST00000447172 505 ntBASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC28.33■■■□□ 2.13
SCAF1Q9H7N4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SCAF1Q9H7N4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 FAM86EP-206ENST00000510506 987 ntBASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 AC004264.1-201ENST00000608354 794 ntBASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC28.31■■■□□ 2.12
SCAF1Q9H7N4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms