Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.62■□□□□ 0.89
NXF3Q9H4D5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 TEX21P-204ENST00000641479 1693 ntBASIC20.61■□□□□ 0.89
NXF3Q9H4D5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 TSPY5P-201ENST00000426936 936 ntBASIC20.61■□□□□ 0.89
NXF3Q9H4D5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 AL441883.1-201ENST00000566170 1045 ntBASIC20.61■□□□□ 0.89
NXF3Q9H4D5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NXF3Q9H4D5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 FAM8A6P-201ENST00000407496 1135 ntBASIC20.6■□□□□ 0.89
NXF3Q9H4D5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 AC009947.2-201ENST00000444014 672 ntBASIC20.6■□□□□ 0.89
NXF3Q9H4D5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NXF3Q9H4D5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 GPAT2P1-201ENST00000444924 1672 ntBASIC20.59■□□□□ 0.89
NXF3Q9H4D5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NXF3Q9H4D5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NXF3Q9H4D5 CR769767.2-201ENST00000622735 460 ntBASIC20.58■□□□□ 0.89
NXF3Q9H4D5 MYC-208ENST00000641036 567 ntBASIC20.58■□□□□ 0.89
NXF3Q9H4D5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NXF3Q9H4D5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.57■□□□□ 0.88
NXF3Q9H4D5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms