Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 REXO1L10P-201ENST00000615707 1290 ntBASIC17.68■□□□□ 0.42
UBQLN3Q9H347 REXO1L12P-201ENST00000622156 912 ntBASIC17.68■□□□□ 0.42
UBQLN3Q9H347 AC073912.3-201ENST00000624414 853 ntBASIC17.68■□□□□ 0.42
UBQLN3Q9H347 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBQLN3Q9H347 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 AC004980.1-204ENST00000429707 299 ntBASIC17.67■□□□□ 0.42
UBQLN3Q9H347 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.67■□□□□ 0.42
UBQLN3Q9H347 AL031985.4-201ENST00000642138 673 ntBASIC17.67■□□□□ 0.42
UBQLN3Q9H347 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN3Q9H347 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN3Q9H347 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
UBQLN3Q9H347 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN3Q9H347 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN3Q9H347 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN3Q9H347 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 MESTP1-201ENST00000404287 994 ntBASIC17.64■□□□□ 0.41
UBQLN3Q9H347 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms