Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 KRT18P31-201ENST00000506277 1292 ntBASIC21■□□□□ 0.95
UBE2OQ9C0C9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 KRT8P8-201ENST00000434750 1448 ntBASIC21■□□□□ 0.95
UBE2OQ9C0C9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2OQ9C0C9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
UBE2OQ9C0C9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 MIR1233-2-201ENST00000408138 82 ntBASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 MIR1233-1-201ENST00000408722 82 ntBASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 AF228730.7-201ENST00000641842 219 ntBASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 PHGDH-210ENST00000641115 1638 ntBASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2OQ9C0C9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 AC092865.5-201ENST00000545435 363 ntBASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 AL121912.1-201ENST00000603683 238 ntBASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 HLA-A-201ENST00000376802 1334 ntBASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBE2OQ9C0C9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 MIR574-201ENST00000385209 96 ntBASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2OQ9C0C9 FAM220CP-201ENST00000395253 831 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms