Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 KRT8P8-201ENST00000434750 1448 ntBASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 POM121L13P-201ENST00000422362 380 ntBASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 Z99916.2-201ENST00000604037 246 ntBASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 SDHAP1-207ENST00000440850 2000 ntBASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXP3Q9BZS1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 AL512353.2-201ENST00000448759 1962 ntBASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 AL390961.4-201ENST00000623958 2535 ntBASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
FOXP3Q9BZS1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 YBX1P10-201ENST00000444752 975 ntBASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXP3Q9BZS1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
FOXP3Q9BZS1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXP3Q9BZS1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXP3Q9BZS1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms