Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 ZNF444P1-201ENST00000559497 298 ntBASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A2Q9BY10 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 LINC01311-201ENST00000565162 1445 ntBASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A2Q9BY10 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 VENTXP5-201ENST00000523979 775 ntBASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A2Q9BY10 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 Z82202.1-201ENST00000623446 1880 ntBASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 KRT8P3-201ENST00000519669 1449 ntBASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A2Q9BY10 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC46A2Q9BY10 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A2Q9BY10 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A2Q9BY10 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms