Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.08■□□□□ 0.81
RHOXF2Q9BQY4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.08■□□□□ 0.8
RHOXF2Q9BQY4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 AC116351.2-201ENST00000606540 1585 ntBASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RHOXF2Q9BQY4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 AC008406.3-201ENST00000620001 1374 ntBASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 AC008764.6-201ENST00000595909 2069 ntBASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 AC099398.1-201ENST00000567919 2776 ntBASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RHOXF2Q9BQY4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 BCL2-203ENST00000589955 5011 ntBASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 YBX1P1-201ENST00000445822 960 ntBASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 AC023632.3-201ENST00000521633 145 ntBASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RHOXF2Q9BQY4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RHOXF2Q9BQY4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms