Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 MIR4785-201ENST00000585005 73 ntBASIC17.67■□□□□ 0.42
TM9SF2Q99805 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 AL032819.2-201ENST00000624543 2162 ntBASIC17.67■□□□□ 0.42
TM9SF2Q99805 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF2Q99805 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF2Q99805 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 HTR7P1-201ENST00000538670 1336 ntBASIC17.66■□□□□ 0.42
TM9SF2Q99805 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF2Q99805 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.66■□□□□ 0.42
TM9SF2Q99805 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TM9SF2Q99805 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TM9SF2Q99805 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.64■□□□□ 0.42
TM9SF2Q99805 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.64■□□□□ 0.42
TM9SF2Q99805 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.64■□□□□ 0.42
TM9SF2Q99805 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TM9SF2Q99805 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TM9SF2Q99805 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
TM9SF2Q99805 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.64■□□□□ 0.41
TM9SF2Q99805 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM9SF2Q99805 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM9SF2Q99805 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM9SF2Q99805 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM9SF2Q99805 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM9SF2Q99805 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TM9SF2Q99805 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM9SF2Q99805 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.64■□□□□ 0.41
TM9SF2Q99805 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms