Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 ANO7L1-203ENST00000602586 1720 ntBASIC17.98■□□□□ 0.47
NR1H4Q96RI1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NR1H4Q96RI1 AC135279.3-201ENST00000610945 1311 ntBASIC17.98■□□□□ 0.47
NR1H4Q96RI1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 AC008764.7-201ENST00000593779 1081 ntBASIC17.97■□□□□ 0.47
NR1H4Q96RI1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 AC080080.1-201ENST00000625121 2420 ntBASIC17.97■□□□□ 0.47
NR1H4Q96RI1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NR1H4Q96RI1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 AC046158.3-201ENST00000624947 2558 ntBASIC17.96■□□□□ 0.47
NR1H4Q96RI1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 AC005224.4-201ENST00000583262 1652 ntBASIC17.96■□□□□ 0.47
NR1H4Q96RI1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NR1H4Q96RI1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
NR1H4Q96RI1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
NR1H4Q96RI1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 POU5F1P4-201ENST00000413175 1085 ntBASIC17.95■□□□□ 0.46
NR1H4Q96RI1 SLC25A6P5-201ENST00000435663 894 ntBASIC17.95■□□□□ 0.46
NR1H4Q96RI1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 AD000864.1-201ENST00000624076 2295 ntBASIC17.95■□□□□ 0.46
NR1H4Q96RI1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
NR1H4Q96RI1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 IRX1P1-201ENST00000438849 1838 ntBASIC17.94■□□□□ 0.46
NR1H4Q96RI1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NR1H4Q96RI1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms