Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 AC069544.1-201ENST00000609399 999 ntBASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
HIST1H2AAQ96QV6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 CROCCP1-201ENST00000426910 5675 ntBASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 LINC01465-201ENST00000408887 1940 ntBASIC16.53■□□□□ 0.24
HIST1H2AAQ96QV6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 AC104417.2-201ENST00000562989 1793 ntBASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 AC239809.2-201ENST00000415381 517 ntBASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 MTDHP1-201ENST00000605323 784 ntBASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.52■□□□□ 0.24
HIST1H2AAQ96QV6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIST1H2AAQ96QV6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIST1H2AAQ96QV6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms