Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 AC138028.4-201ENST00000564984 1845 ntBASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PDLIM2Q96JY6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 AD000864.1-201ENST00000624076 2295 ntBASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 MFSD11-216ENST00000590393 1141 ntBASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.1■□□□□ 0.97
PDLIM2Q96JY6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 AL591742.1-201ENST00000604433 565 ntBASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 MIR6084-201ENST00000622012 110 ntBASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.09■□□□□ 0.97
PDLIM2Q96JY6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 AC093677.2-201ENST00000600169 1863 ntBASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 AC016405.3-201ENST00000607710 860 ntBASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.08■□□□□ 0.97
PDLIM2Q96JY6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 PP12613-201ENST00000424958 2230 ntBASIC21.08■□□□□ 0.96
PDLIM2Q96JY6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PDLIM2Q96JY6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms