Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.12■□□□□ 0.65
SIPA1Q96FS4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIPA1Q96FS4 SDHAP1-207ENST00000440850 2000 ntBASIC19.12■□□□□ 0.65
SIPA1Q96FS4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SIPA1Q96FS4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 GCSHP2-201ENST00000560971 527 ntBASIC19.11■□□□□ 0.65
SIPA1Q96FS4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SIPA1Q96FS4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 AC112907.3-201ENST00000577781 2400 ntBASIC19.1■□□□□ 0.65
SIPA1Q96FS4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 AC112907.2-201ENST00000448639 330 ntBASIC19.1■□□□□ 0.65
SIPA1Q96FS4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIPA1Q96FS4 AL157384.1-201ENST00000445995 2473 ntBASIC19.09■□□□□ 0.65
SIPA1Q96FS4 AC005332.1-201ENST00000577698 1310 ntBASIC19.09■□□□□ 0.65
SIPA1Q96FS4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 STARP1-201ENST00000397973 869 ntBASIC19.09■□□□□ 0.65
SIPA1Q96FS4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 CR769767.2-201ENST00000622735 460 ntBASIC19.09■□□□□ 0.65
SIPA1Q96FS4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
SIPA1Q96FS4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SIPA1Q96FS4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIPA1Q96FS4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIPA1Q96FS4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SIPA1Q96FS4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.08■□□□□ 0.65
SIPA1Q96FS4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.08■□□□□ 0.65
SIPA1Q96FS4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 KRT18P56-201ENST00000507275 550 ntBASIC19.08■□□□□ 0.64
SIPA1Q96FS4 VENTXP5-201ENST00000523979 775 ntBASIC19.08■□□□□ 0.64
SIPA1Q96FS4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 AC093458.2-201ENST00000623150 629 ntBASIC19.08■□□□□ 0.64
SIPA1Q96FS4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIPA1Q96FS4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms