Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRRC58Q96CX6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRRC58Q96CX6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
LRRC58Q96CX6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRRC58Q96CX6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LRRC58Q96CX6 MKRN4P-201ENST00000444706 1521 ntBASIC18.14■□□□□ 0.49
LRRC58Q96CX6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 AC006557.6-201ENST00000623071 864 ntBASIC18.14■□□□□ 0.49
LRRC58Q96CX6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC58Q96CX6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 BX276092.2-201ENST00000417668 665 ntBASIC18.13■□□□□ 0.49
LRRC58Q96CX6 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.13■□□□□ 0.49
LRRC58Q96CX6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 RAP2CP1-201ENST00000605103 478 ntBASIC18.13■□□□□ 0.49
LRRC58Q96CX6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 ABALON-201ENST00000629058 1903 ntBASIC18.13■□□□□ 0.49
LRRC58Q96CX6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC58Q96CX6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC58Q96CX6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRRC58Q96CX6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms