Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.53■■□□□ 1.04
VTI1AQ96AJ9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
VTI1AQ96AJ9 AC005332.1-201ENST00000577698 1310 ntBASIC21.52■■□□□ 1.03
VTI1AQ96AJ9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 KRT8P45-201ENST00000414328 1447 ntBASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 AL691432.2-201ENST00000607222 2038 ntBASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.51■■□□□ 1.03
VTI1AQ96AJ9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 VENTXP5-201ENST00000523979 775 ntBASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 CKBP1-201ENST00000565489 1086 ntBASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VTI1AQ96AJ9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 AL450487.1-201ENST00000426799 995 ntBASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 DUSP5P1-201ENST00000441325 1139 ntBASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 KRT18P38-201ENST00000449496 1282 ntBASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 AC069148.1-201ENST00000608741 768 ntBASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VTI1AQ96AJ9 AC009237.14-201ENST00000609975 1594 ntBASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.48■■□□□ 1.03
VTI1AQ96AJ9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms