Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
DDX1Q92499 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.34■□□□□ 0.85
DDX1Q92499 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.34■□□□□ 0.85
DDX1Q92499 RARRES2P10-201ENST00000564312 460 ntBASIC20.34■□□□□ 0.85
DDX1Q92499 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX1Q92499 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.34■□□□□ 0.85
DDX1Q92499 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.34■□□□□ 0.85
DDX1Q92499 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DDX1Q92499 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX1Q92499 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
DDX1Q92499 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX1Q92499 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.33■□□□□ 0.85
DDX1Q92499 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.33■□□□□ 0.85
DDX1Q92499 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
DDX1Q92499 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX1Q92499 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX1Q92499 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DDX1Q92499 KSR1P1-201ENST00000446298 240 ntBASIC20.33■□□□□ 0.85
DDX1Q92499 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX1Q92499 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.33■□□□□ 0.85
DDX1Q92499 RN7SL850P-201ENST00000579959 291 ntBASIC20.33■□□□□ 0.85
DDX1Q92499 AF186192.3-201ENST00000583427 947 ntBASIC20.33■□□□□ 0.85
DDX1Q92499 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.33■□□□□ 0.85
DDX1Q92499 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX1Q92499 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX1Q92499 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX1Q92499 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX1Q92499 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DDX1Q92499 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX1Q92499 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.32■□□□□ 0.84
DDX1Q92499 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
DDX1Q92499 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX1Q92499 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX1Q92499 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX1Q92499 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DDX1Q92499 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DDX1Q92499 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DDX1Q92499 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
DDX1Q92499 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
DDX1Q92499 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
DDX1Q92499 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX1Q92499 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX1Q92499 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
DDX1Q92499 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX1Q92499 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
DDX1Q92499 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
DDX1Q92499 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 AP002982.1-201ENST00000492365 877 ntBASIC20.31■□□□□ 0.84
DDX1Q92499 AC092865.7-201ENST00000641832 219 ntBASIC20.31■□□□□ 0.84
DDX1Q92499 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.31■□□□□ 0.84
DDX1Q92499 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX1Q92499 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX1Q92499 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX1Q92499 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
DDX1Q92499 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
DDX1Q92499 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.3■□□□□ 0.84
DDX1Q92499 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.3■□□□□ 0.84
DDX1Q92499 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 AC131212.4-201ENST00000623606 975 ntBASIC20.3■□□□□ 0.84
DDX1Q92499 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms