Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GUSBP6-202ENST00000438529 1198 ntBASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 PNMA6B-201ENST00000538162 1200 ntBASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SLC44A1Q8WWI5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 AC005332.8-201ENST00000622750 2735 ntBASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 AC060766.5-201ENST00000590539 871 ntBASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC44A1Q8WWI5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 TSPY21P-201ENST00000433481 731 ntBASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 AL133373.2-201ENST00000623187 2828 ntBASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC44A1Q8WWI5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 AC097658.1-201ENST00000475555 843 ntBASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 MIR4758-201ENST00000577688 71 ntBASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
SLC44A1Q8WWI5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms