Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HMGB4Q8WW32 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 TSPY23P-201ENST00000440136 739 ntBASIC19.11■□□□□ 0.65
HMGB4Q8WW32 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGB4Q8WW32 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HMGB4Q8WW32 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 AC012313.10-201ENST00000623509 926 ntBASIC19.09■□□□□ 0.65
HMGB4Q8WW32 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HMGB4Q8WW32 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 SDHAP1-207ENST00000440850 2000 ntBASIC19.08■□□□□ 0.65
HMGB4Q8WW32 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HMGB4Q8WW32 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HMGB4Q8WW32 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms