Protein–RNA interactions for Protein: Q8TB73

NDNF, Protein NDNF, humanhuman

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNFQ8TB73 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDNFQ8TB73 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NDNFQ8TB73 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
NDNFQ8TB73 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDNFQ8TB73 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 HCG11-201ENST00000411553 5696 ntBASIC17.18■□□□□ 0.34
NDNFQ8TB73 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 ANO7L1-203ENST00000602586 1720 ntBASIC17.18■□□□□ 0.34
NDNFQ8TB73 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NDNFQ8TB73 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDNFQ8TB73 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NDNFQ8TB73 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 AC073592.3-201ENST00000625118 1834 ntBASIC17.17■□□□□ 0.34
NDNFQ8TB73 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NDNFQ8TB73 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.17■□□□□ 0.34
NDNFQ8TB73 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.17■□□□□ 0.34
NDNFQ8TB73 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.17■□□□□ 0.34
NDNFQ8TB73 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.17■□□□□ 0.34
NDNFQ8TB73 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.17■□□□□ 0.34
NDNFQ8TB73 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDNFQ8TB73 IRX1P1-201ENST00000438849 1838 ntBASIC17.17■□□□□ 0.34
NDNFQ8TB73 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 PHGDH-210ENST00000641115 1638 ntBASIC17.16■□□□□ 0.34
NDNFQ8TB73 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NDNFQ8TB73 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDNFQ8TB73 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.15■□□□□ 0.34
NDNFQ8TB73 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDNFQ8TB73 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDNFQ8TB73 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NDNFQ8TB73 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDNFQ8TB73 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDNFQ8TB73 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.15■□□□□ 0.34
NDNFQ8TB73 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDNFQ8TB73 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms