Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 AL353807.1-201ENST00000427475 662 ntBASIC17.85■□□□□ 0.45
NUP43Q8NFH3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 RPS2P4-201ENST00000476944 856 ntBASIC17.85■□□□□ 0.45
NUP43Q8NFH3 Z85996.1-201ENST00000494644 937 ntBASIC17.85■□□□□ 0.45
NUP43Q8NFH3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.85■□□□□ 0.45
NUP43Q8NFH3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 AL353708.3-201ENST00000610272 989 ntBASIC17.85■□□□□ 0.45
NUP43Q8NFH3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NUP43Q8NFH3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.84■□□□□ 0.45
NUP43Q8NFH3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 AC004980.1-204ENST00000429707 299 ntBASIC17.84■□□□□ 0.45
NUP43Q8NFH3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 TSPY23P-201ENST00000440136 739 ntBASIC17.84■□□□□ 0.45
NUP43Q8NFH3 KSR1P1-201ENST00000446298 240 ntBASIC17.84■□□□□ 0.45
NUP43Q8NFH3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NUP43Q8NFH3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NUP43Q8NFH3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 PRORSD1P-201ENST00000295112 541 ntBASIC17.83■□□□□ 0.44
NUP43Q8NFH3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 RARRES2P10-201ENST00000564312 460 ntBASIC17.83■□□□□ 0.44
NUP43Q8NFH3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 AC138932.1-201ENST00000534164 6830 ntBASIC17.83■□□□□ 0.44
NUP43Q8NFH3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NUP43Q8NFH3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NUP43Q8NFH3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms