Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHDHQ8NE62 LTB4R2-202ENST00000528054 3092 ntBASIC18.06■□□□□ 0.48
CHDHQ8NE62 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHDHQ8NE62 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHDHQ8NE62 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHDHQ8NE62 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.06■□□□□ 0.48
CHDHQ8NE62 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHDHQ8NE62 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 KRT18P16-201ENST00000510337 1294 ntBASIC18.05■□□□□ 0.48
CHDHQ8NE62 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 AC008403.3-201ENST00000598924 454 ntBASIC18.05■□□□□ 0.48
CHDHQ8NE62 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 AC073912.3-201ENST00000624414 853 ntBASIC18.05■□□□□ 0.48
CHDHQ8NE62 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 PCDHB18P-201ENST00000524813 2368 ntBASIC18.05■□□□□ 0.48
CHDHQ8NE62 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 KRT8P8-201ENST00000434750 1448 ntBASIC18.05■□□□□ 0.48
CHDHQ8NE62 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHDHQ8NE62 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHDHQ8NE62 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 FAM210CP-201ENST00000445714 574 ntBASIC18.04■□□□□ 0.48
CHDHQ8NE62 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 AL133373.2-201ENST00000623187 2828 ntBASIC18.04■□□□□ 0.48
CHDHQ8NE62 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHDHQ8NE62 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHDHQ8NE62 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 AC026366.1-201ENST00000488803 879 ntBASIC18.03■□□□□ 0.48
CHDHQ8NE62 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 ZNF815P-204ENST00000434898 1737 ntBASIC18.03■□□□□ 0.48
CHDHQ8NE62 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CHDHQ8NE62 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHDHQ8NE62 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CHDHQ8NE62 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHDHQ8NE62 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.02■□□□□ 0.48
CHDHQ8NE62 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHDHQ8NE62 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.02■□□□□ 0.48
CHDHQ8NE62 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CHDHQ8NE62 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms