Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.98■□□□□ 0.47
SIMC1Q8NDZ2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 UBE2SP1-201ENST00000450587 669 ntBASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 RARRES2P10-201ENST00000564312 460 ntBASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 Z99916.2-201ENST00000604037 246 ntBASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.97■□□□□ 0.47
SIMC1Q8NDZ2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 AP002982.1-201ENST00000492365 877 ntBASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 AL160286.2-201ENST00000567150 934 ntBASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 NEFHP1-201ENST00000412845 2629 ntBASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SIMC1Q8NDZ2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SIMC1Q8NDZ2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SIMC1Q8NDZ2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SIMC1Q8NDZ2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.96■□□□□ 0.46
SIMC1Q8NDZ2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 AC004980.1-204ENST00000429707 299 ntBASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 Z85996.1-201ENST00000494644 937 ntBASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 AL353708.3-201ENST00000610272 989 ntBASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIMC1Q8NDZ2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms