Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 RCC2P6-201ENST00000526625 1557 ntBASIC21.58■■□□□ 1.05
RETREG2Q8NC44 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 AC004951.3-201ENST00000418645 1148 ntBASIC21.58■■□□□ 1.05
RETREG2Q8NC44 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 CCR12P-201ENST00000446203 998 ntBASIC21.58■■□□□ 1.05
RETREG2Q8NC44 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETREG2Q8NC44 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 AP000974.1-201ENST00000623909 2387 ntBASIC21.58■■□□□ 1.04
RETREG2Q8NC44 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETREG2Q8NC44 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 UPK3BP1-201ENST00000428678 509 ntBASIC21.57■■□□□ 1.04
RETREG2Q8NC44 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETREG2Q8NC44 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RETREG2Q8NC44 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 RNF152P1-201ENST00000397754 604 ntBASIC21.55■■□□□ 1.04
RETREG2Q8NC44 AC117947.1-201ENST00000427448 529 ntBASIC21.55■■□□□ 1.04
RETREG2Q8NC44 MFAP1P1-201ENST00000442257 1255 ntBASIC21.55■■□□□ 1.04
RETREG2Q8NC44 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 FAM207BP-201ENST00000447172 505 ntBASIC21.55■■□□□ 1.04
RETREG2Q8NC44 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 AL358472.4-201ENST00000633140 710 ntBASIC21.55■■□□□ 1.04
RETREG2Q8NC44 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 AL020996.1-203ENST00000536896 2307 ntBASIC21.55■■□□□ 1.04
RETREG2Q8NC44 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RETREG2Q8NC44 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms