Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIML2Q8N7C3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIML2Q8N7C3 TFP1-202ENST00000475455 1573 ntBASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 AL050303.2-201ENST00000619798 666 ntBASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIML2Q8N7C3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 RAP2CP1-201ENST00000605103 478 ntBASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 AC009113.1-201ENST00000570267 2443 ntBASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 AC135050.7-201ENST00000624508 2218 ntBASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIML2Q8N7C3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 IKBKGP1-201ENST00000612193 1073 ntBASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRIML2Q8N7C3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIML2Q8N7C3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIML2Q8N7C3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIML2Q8N7C3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIML2Q8N7C3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRIML2Q8N7C3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIML2Q8N7C3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms