Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TTC39CQ8N584 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 AC079598.2-202ENST00000546624 1451 ntBASIC20.3■□□□□ 0.84
TTC39CQ8N584 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TTC39CQ8N584 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.29■□□□□ 0.84
TTC39CQ8N584 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TTC39CQ8N584 KRT8P3-201ENST00000519669 1449 ntBASIC20.28■□□□□ 0.84
TTC39CQ8N584 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TTC39CQ8N584 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.28■□□□□ 0.84
TTC39CQ8N584 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.28■□□□□ 0.84
TTC39CQ8N584 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 AP000525.1-201ENST00000608286 694 ntBASIC20.28■□□□□ 0.84
TTC39CQ8N584 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TTC39CQ8N584 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.28■□□□□ 0.84
TTC39CQ8N584 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TTC39CQ8N584 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39CQ8N584 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39CQ8N584 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TTC39CQ8N584 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39CQ8N584 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39CQ8N584 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39CQ8N584 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39CQ8N584 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC39CQ8N584 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TTC39CQ8N584 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.27■□□□□ 0.84
TTC39CQ8N584 SLC25A1P2-201ENST00000430693 912 ntBASIC20.27■□□□□ 0.84
TTC39CQ8N584 C2orf69P3-201ENST00000565542 1120 ntBASIC20.27■□□□□ 0.84
TTC39CQ8N584 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
TTC39CQ8N584 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TTC39CQ8N584 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TTC39CQ8N584 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39CQ8N584 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39CQ8N584 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39CQ8N584 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.27■□□□□ 0.83
TTC39CQ8N584 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39CQ8N584 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TTC39CQ8N584 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.27■□□□□ 0.83
TTC39CQ8N584 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 MMP23A-201ENST00000234610 1017 ntBASIC20.26■□□□□ 0.83
TTC39CQ8N584 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
TTC39CQ8N584 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TTC39CQ8N584 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TTC39CQ8N584 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
TTC39CQ8N584 MIR1238-201ENST00000408483 83 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms