Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.01■□□□□ 0.95
NME8Q8N427 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.01■□□□□ 0.95
NME8Q8N427 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NME8Q8N427 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21■□□□□ 0.95
NME8Q8N427 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NME8Q8N427 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
NME8Q8N427 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21■□□□□ 0.95
NME8Q8N427 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NME8Q8N427 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21■□□□□ 0.95
NME8Q8N427 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21■□□□□ 0.95
NME8Q8N427 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NME8Q8N427 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21■□□□□ 0.95
NME8Q8N427 TSPY23P-201ENST00000440136 739 ntBASIC21■□□□□ 0.95
NME8Q8N427 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21■□□□□ 0.95
NME8Q8N427 AL441883.1-201ENST00000566170 1045 ntBASIC21■□□□□ 0.95
NME8Q8N427 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21■□□□□ 0.95
NME8Q8N427 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21■□□□□ 0.95
NME8Q8N427 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NME8Q8N427 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21■□□□□ 0.95
NME8Q8N427 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21■□□□□ 0.95
NME8Q8N427 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NME8Q8N427 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
NME8Q8N427 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NME8Q8N427 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.99■□□□□ 0.95
NME8Q8N427 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 AC008622.2-201ENST00000617006 1229 ntBASIC20.99■□□□□ 0.95
NME8Q8N427 AL023973.1-201ENST00000624619 620 ntBASIC20.99■□□□□ 0.95
NME8Q8N427 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.99■□□□□ 0.95
NME8Q8N427 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.99■□□□□ 0.95
NME8Q8N427 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NME8Q8N427 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.99■□□□□ 0.95
NME8Q8N427 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
NME8Q8N427 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NME8Q8N427 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.98■□□□□ 0.95
NME8Q8N427 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NME8Q8N427 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.98■□□□□ 0.95
NME8Q8N427 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.98■□□□□ 0.95
NME8Q8N427 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.98■□□□□ 0.95
NME8Q8N427 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NME8Q8N427 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.98■□□□□ 0.95
NME8Q8N427 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NME8Q8N427 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.98■□□□□ 0.95
NME8Q8N427 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.98■□□□□ 0.95
NME8Q8N427 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
NME8Q8N427 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.97■□□□□ 0.95
NME8Q8N427 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.97■□□□□ 0.95
NME8Q8N427 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.97■□□□□ 0.95
NME8Q8N427 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
NME8Q8N427 AL121956.5-201ENST00000625261 221 ntBASIC20.97■□□□□ 0.95
NME8Q8N427 AL358472.4-201ENST00000633140 710 ntBASIC20.97■□□□□ 0.95
NME8Q8N427 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NME8Q8N427 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms