Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 UPK3BP1-201ENST00000428678 509 ntBASIC20.66■□□□□ 0.9
VPS52Q8N1B4 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.66■□□□□ 0.9
VPS52Q8N1B4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 MYC-208ENST00000641036 567 ntBASIC20.66■□□□□ 0.9
VPS52Q8N1B4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
VPS52Q8N1B4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 AC092647.4-201ENST00000457211 535 ntBASIC20.65■□□□□ 0.9
VPS52Q8N1B4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 AL353719.1-201ENST00000566847 864 ntBASIC20.65■□□□□ 0.9
VPS52Q8N1B4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VPS52Q8N1B4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS52Q8N1B4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS52Q8N1B4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.64■□□□□ 0.9
VPS52Q8N1B4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS52Q8N1B4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.64■□□□□ 0.9
VPS52Q8N1B4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 AL031133.1-201ENST00000406807 723 ntBASIC20.64■□□□□ 0.89
VPS52Q8N1B4 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.64■□□□□ 0.89
VPS52Q8N1B4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS52Q8N1B4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 AC011558.1-201ENST00000623459 338 ntBASIC20.63■□□□□ 0.89
VPS52Q8N1B4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS52Q8N1B4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS52Q8N1B4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms