Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 SLC25A1P1-201ENST00000528351 927 ntBASIC28.3■■■□□ 2.12
ABCA6Q8N139 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ABCA6Q8N139 Z83836.1-201ENST00000624605 1642 ntBASIC28.29■■■□□ 2.12
ABCA6Q8N139 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 SAPCD2P3-201ENST00000455031 850 ntBASIC28.29■■■□□ 2.12
ABCA6Q8N139 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 REXO1L6P-202ENST00000619970 1078 ntBASIC28.29■■■□□ 2.12
ABCA6Q8N139 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 TK1-205ENST00000590862 642 ntTSL 3 BASIC28.29■■■□□ 2.12
ABCA6Q8N139 AC099336.1-202ENST00000602961 463 ntBASIC28.29■■■□□ 2.12
ABCA6Q8N139 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ABCA6Q8N139 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ABCA6Q8N139 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC28.28■■■□□ 2.12
ABCA6Q8N139 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC28.27■■■□□ 2.12
ABCA6Q8N139 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC28.27■■■□□ 2.12
ABCA6Q8N139 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC28.27■■■□□ 2.12
ABCA6Q8N139 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC28.27■■■□□ 2.12
ABCA6Q8N139 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC28.27■■■□□ 2.12
ABCA6Q8N139 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC28.27■■■□□ 2.12
ABCA6Q8N139 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
ABCA6Q8N139 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
ABCA6Q8N139 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
ABCA6Q8N139 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC28.26■■■□□ 2.11
ABCA6Q8N139 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC28.26■■■□□ 2.11
ABCA6Q8N139 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC28.26■■■□□ 2.11
ABCA6Q8N139 AC112497.1-201ENST00000624824 639 ntBASIC28.26■■■□□ 2.11
ABCA6Q8N139 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC28.26■■■□□ 2.11
ABCA6Q8N139 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 AC020907.5-201ENST00000624372 1936 ntBASIC28.26■■■□□ 2.11
ABCA6Q8N139 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
ABCA6Q8N139 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ABCA6Q8N139 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC28.25■■■□□ 2.11
ABCA6Q8N139 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC28.25■■■□□ 2.11
ABCA6Q8N139 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
ABCA6Q8N139 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCA6Q8N139 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
ABCA6Q8N139 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCA6Q8N139 GRAMD4P1-201ENST00000435181 1110 ntBASIC28.25■■■□□ 2.11
ABCA6Q8N139 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC28.25■■■□□ 2.11
ABCA6Q8N139 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA6Q8N139 AL592071.1-201ENST00000611956 408 ntBASIC28.25■■■□□ 2.11
ABCA6Q8N139 MIR7706-201ENST00000613747 67 ntBASIC28.25■■■□□ 2.11
ABCA6Q8N139 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA6Q8N139 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA6Q8N139 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA6Q8N139 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms