Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.88■□□□□ 0.61
APLFQ8IW19 FP700111.2-201ENST00000619190 1892 ntBASIC18.88■□□□□ 0.61
APLFQ8IW19 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APLFQ8IW19 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
APLFQ8IW19 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
APLFQ8IW19 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
APLFQ8IW19 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
APLFQ8IW19 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.88■□□□□ 0.61
APLFQ8IW19 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.87■□□□□ 0.61
APLFQ8IW19 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
APLFQ8IW19 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.87■□□□□ 0.61
APLFQ8IW19 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
APLFQ8IW19 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
APLFQ8IW19 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 AL390719.1-204ENST00000412397 1219 ntBASIC18.87■□□□□ 0.61
APLFQ8IW19 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.87■□□□□ 0.61
APLFQ8IW19 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.87■□□□□ 0.61
APLFQ8IW19 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
APLFQ8IW19 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
APLFQ8IW19 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.87■□□□□ 0.61
APLFQ8IW19 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
APLFQ8IW19 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
APLFQ8IW19 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.87■□□□□ 0.61
APLFQ8IW19 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.86■□□□□ 0.61
APLFQ8IW19 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
APLFQ8IW19 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 TMEM179-206ENST00000616017 1645 ntBASIC18.86■□□□□ 0.61
APLFQ8IW19 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.86■□□□□ 0.61
APLFQ8IW19 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.86■□□□□ 0.61
APLFQ8IW19 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 TSPY7P-201ENST00000431358 1114 ntBASIC18.86■□□□□ 0.61
APLFQ8IW19 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.86■□□□□ 0.61
APLFQ8IW19 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.86■□□□□ 0.61
APLFQ8IW19 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.86■□□□□ 0.61
APLFQ8IW19 RARRES2P10-201ENST00000564312 460 ntBASIC18.86■□□□□ 0.61
APLFQ8IW19 MIR4785-201ENST00000585005 73 ntBASIC18.86■□□□□ 0.61
APLFQ8IW19 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.86■□□□□ 0.61
APLFQ8IW19 AL356652.1-201ENST00000615962 565 ntBASIC18.86■□□□□ 0.61
APLFQ8IW19 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
APLFQ8IW19 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
APLFQ8IW19 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
APLFQ8IW19 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
APLFQ8IW19 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
APLFQ8IW19 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
APLFQ8IW19 KRASP1-201ENST00000407852 552 ntBASIC18.85■□□□□ 0.61
APLFQ8IW19 MIR1224-201ENST00000408193 85 ntBASIC18.85■□□□□ 0.61
APLFQ8IW19 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.85■□□□□ 0.61
APLFQ8IW19 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.85■□□□□ 0.61
APLFQ8IW19 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.85■□□□□ 0.61
APLFQ8IW19 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 AC006557.6-201ENST00000623071 864 ntBASIC18.85■□□□□ 0.61
APLFQ8IW19 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
APLFQ8IW19 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.85■□□□□ 0.61
APLFQ8IW19 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.85■□□□□ 0.61
APLFQ8IW19 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
APLFQ8IW19 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms