Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC28Q86X40 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRC28Q86X40 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRC28Q86X40 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRRC28Q86X40 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRC28Q86X40 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 PNMA6B-201ENST00000538162 1200 ntBASIC16.95■□□□□ 0.3
LRRC28Q86X40 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRC28Q86X40 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRC28Q86X40 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 AC068880.1-201ENST00000507289 2297 ntBASIC16.94■□□□□ 0.3
LRRC28Q86X40 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 ESRRAP1-201ENST00000400596 1257 ntBASIC16.94■□□□□ 0.3
LRRC28Q86X40 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
LRRC28Q86X40 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRRC28Q86X40 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC28Q86X40 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
LRRC28Q86X40 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms