Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 MST1L-201ENST00000442552 2185 ntBASIC19.16■□□□□ 0.66
PACS2Q86VP3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS2Q86VP3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS2Q86VP3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PACS2Q86VP3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PACS2Q86VP3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PACS2Q86VP3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PACS2Q86VP3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.14■□□□□ 0.66
PACS2Q86VP3 AC135776.1-201ENST00000319817 2481 ntBASIC19.14■□□□□ 0.66
PACS2Q86VP3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 AC007322.1-201ENST00000426983 750 ntBASIC19.14■□□□□ 0.65
PACS2Q86VP3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 DUX4L16-201ENST00000555130 1264 ntBASIC19.14■□□□□ 0.65
PACS2Q86VP3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS2Q86VP3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS2Q86VP3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 TERF1P5-201ENST00000477545 1207 ntBASIC19.13■□□□□ 0.65
PACS2Q86VP3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS2Q86VP3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.13■□□□□ 0.65
PACS2Q86VP3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS2Q86VP3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms