Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ZNF546Q86UE3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 PCDHA12-202ENST00000613593 2588 ntBASIC15.86■□□□□ 0.13
ZNF546Q86UE3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 AC138907.5-202ENST00000569484 235 ntBASIC15.86■□□□□ 0.13
ZNF546Q86UE3 TPRG1LP1-201ENST00000598702 760 ntBASIC15.86■□□□□ 0.13
ZNF546Q86UE3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 AC073592.3-201ENST00000625118 1834 ntBASIC15.86■□□□□ 0.13
ZNF546Q86UE3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ZNF546Q86UE3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 IRX1P1-201ENST00000438849 1838 ntBASIC15.85■□□□□ 0.13
ZNF546Q86UE3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.85■□□□□ 0.13
ZNF546Q86UE3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 AC091305.1-201ENST00000479476 895 ntBASIC15.84■□□□□ 0.13
ZNF546Q86UE3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 PBX2P1-201ENST00000493219 1291 ntBASIC15.84■□□□□ 0.13
ZNF546Q86UE3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF546Q86UE3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms