Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 CKBP1-201ENST00000565489 1086 ntBASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 AC093525.10-201ENST00000625130 1569 ntBASIC16.43■□□□□ 0.22
COLCA1Q6ZS62 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 FAM207BP-201ENST00000447172 505 ntBASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 AC008550.1-201ENST00000511500 884 ntBASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 AC093503.3-201ENST00000624917 2352 ntBASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.42■□□□□ 0.22
COLCA1Q6ZS62 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 DGCR10-201ENST00000609839 495 ntBASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 AC083906.6-201ENST00000641366 219 ntBASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 RNF165-205ENST00000588679 2904 ntBASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COLCA1Q6ZS62 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms