Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 TMEM191A-211ENST00000637163 1067 ntBASIC16.59■□□□□ 0.25
C11orf88Q6PI97 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 AC009113.1-201ENST00000570267 2443 ntBASIC16.59■□□□□ 0.25
C11orf88Q6PI97 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C11orf88Q6PI97 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf88Q6PI97 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf88Q6PI97 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
C11orf88Q6PI97 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf88Q6PI97 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
C11orf88Q6PI97 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.58■□□□□ 0.25
C11orf88Q6PI97 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 CYP2T1P-201ENST00000432607 1285 ntBASIC16.58■□□□□ 0.24
C11orf88Q6PI97 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 AC068338.2-201ENST00000563278 1430 ntBASIC16.58■□□□□ 0.24
C11orf88Q6PI97 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 AC020916.1-201ENST00000587762 1774 ntBASIC16.58■□□□□ 0.24
C11orf88Q6PI97 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C11orf88Q6PI97 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 MKRN4P-201ENST00000444706 1521 ntBASIC16.57■□□□□ 0.24
C11orf88Q6PI97 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.57■□□□□ 0.24
C11orf88Q6PI97 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.57■□□□□ 0.24
C11orf88Q6PI97 CROCCP3-202ENST00000420820 1947 ntBASIC16.57■□□□□ 0.24
C11orf88Q6PI97 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 AC135050.7-201ENST00000624508 2218 ntBASIC16.56■□□□□ 0.24
C11orf88Q6PI97 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
C11orf88Q6PI97 PGM5P4-201ENST00000421970 445 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms