Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LYSMD4Q5XG99 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 KRT18P1-202ENST00000452408 1331 ntBASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LYSMD4Q5XG99 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 SEC1P-202ENST00000473944 940 ntBASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 AL136038.4-201ENST00000603606 1261 ntBASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 IFNL4P1-201ENST00000607083 540 ntBASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LYSMD4Q5XG99 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 AC079602.3-201ENST00000623931 403 ntBASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 AC112497.1-201ENST00000624824 639 ntBASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 AL157888.1-201ENST00000631930 593 ntBASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LYSMD4Q5XG99 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms