Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SGO1Q5FBB7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 AC006333.2-201ENST00000607957 2099 ntBASIC18.53■□□□□ 0.56
SGO1Q5FBB7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 AC026366.1-201ENST00000488803 879 ntBASIC18.53■□□□□ 0.56
SGO1Q5FBB7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 AC069544.1-201ENST00000609399 999 ntBASIC18.53■□□□□ 0.56
SGO1Q5FBB7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SGO1Q5FBB7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 MTDHP1-201ENST00000605323 784 ntBASIC18.52■□□□□ 0.56
SGO1Q5FBB7 AL023875.1-201ENST00000640777 796 ntBASIC18.52■□□□□ 0.56
SGO1Q5FBB7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SGO1Q5FBB7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.52■□□□□ 0.55
SGO1Q5FBB7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SGO1Q5FBB7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SGO1Q5FBB7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.52■□□□□ 0.55
SGO1Q5FBB7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 IRX1P1-201ENST00000438849 1838 ntBASIC18.51■□□□□ 0.55
SGO1Q5FBB7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 KRT18P6-201ENST00000555540 1265 ntBASIC18.51■□□□□ 0.55
SGO1Q5FBB7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
SGO1Q5FBB7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms