Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
USH1GQ495M9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.9■■□□□ 1.1
USH1GQ495M9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.9■■□□□ 1.1
USH1GQ495M9 AC117947.1-201ENST00000427448 529 ntBASIC21.9■■□□□ 1.1
USH1GQ495M9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.9■■□□□ 1.1
USH1GQ495M9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.9■■□□□ 1.1
USH1GQ495M9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.9■■□□□ 1.1
USH1GQ495M9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.9■■□□□ 1.1
USH1GQ495M9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.9■■□□□ 1.1
USH1GQ495M9 AC139887.4-201ENST00000607877 719 ntBASIC21.9■■□□□ 1.1
USH1GQ495M9 AL590326.2-201ENST00000625139 305 ntBASIC21.9■■□□□ 1.1
USH1GQ495M9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
USH1GQ495M9 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.9■■□□□ 1.1
USH1GQ495M9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
USH1GQ495M9 KRT8P45-201ENST00000414328 1447 ntBASIC21.89■■□□□ 1.1
USH1GQ495M9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.89■■□□□ 1.1
USH1GQ495M9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.89■■□□□ 1.1
USH1GQ495M9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
USH1GQ495M9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
USH1GQ495M9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.89■■□□□ 1.1
USH1GQ495M9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.89■■□□□ 1.09
USH1GQ495M9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
USH1GQ495M9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
USH1GQ495M9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
USH1GQ495M9 AK4P3-201ENST00000418260 669 ntBASIC21.89■■□□□ 1.09
USH1GQ495M9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
USH1GQ495M9 BX664615.1-201ENST00000443558 458 ntBASIC21.89■■□□□ 1.09
USH1GQ495M9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.89■■□□□ 1.09
USH1GQ495M9 WWOX-216ENST00000569818 525 ntBASIC21.89■■□□□ 1.09
USH1GQ495M9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.89■■□□□ 1.09
USH1GQ495M9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
USH1GQ495M9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
USH1GQ495M9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
USH1GQ495M9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
USH1GQ495M9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
USH1GQ495M9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 ARMC10P1-201ENST00000313754 855 ntBASIC21.88■■□□□ 1.09
USH1GQ495M9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
USH1GQ495M9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.88■■□□□ 1.09
USH1GQ495M9 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.88■■□□□ 1.09
USH1GQ495M9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.88■■□□□ 1.09
USH1GQ495M9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
USH1GQ495M9 AC141257.4-201ENST00000634557 245 ntBASIC21.88■■□□□ 1.09
USH1GQ495M9 AC136944.6-201ENST00000634818 245 ntBASIC21.88■■□□□ 1.09
USH1GQ495M9 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.88■■□□□ 1.09
USH1GQ495M9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.88■■□□□ 1.09
USH1GQ495M9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
USH1GQ495M9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
USH1GQ495M9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
USH1GQ495M9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.88■■□□□ 1.09
USH1GQ495M9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
USH1GQ495M9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.88■■□□□ 1.09
USH1GQ495M9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
USH1GQ495M9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.87■■□□□ 1.09
USH1GQ495M9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.87■■□□□ 1.09
USH1GQ495M9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
USH1GQ495M9 MIR4674-201ENST00000582457 87 ntBASIC21.87■■□□□ 1.09
USH1GQ495M9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
USH1GQ495M9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
USH1GQ495M9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.87■■□□□ 1.09
USH1GQ495M9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
USH1GQ495M9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms