Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SPHKAPQ2M3C7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC27.45■■□□□ 1.98
SPHKAPQ2M3C7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SPHKAPQ2M3C7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.98
SPHKAPQ2M3C7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 AC024243.1-201ENST00000609234 778 ntBASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 AC079602.3-201ENST00000623931 403 ntBASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 PWWP2AP1-201ENST00000429776 2273 ntBASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
SPHKAPQ2M3C7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC27.43■■□□□ 1.98
SPHKAPQ2M3C7 LINC01521-201ENST00000504184 1943 ntBASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC27.42■■□□□ 1.98
SPHKAPQ2M3C7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 MIR3917-201ENST00000580971 93 ntBASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
SPHKAPQ2M3C7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 KATNBL1P6-202ENST00000562413 1466 ntBASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
SPHKAPQ2M3C7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 HOXB1-202ENST00000577092 1414 ntBASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC27.39■■□□□ 1.98
SPHKAPQ2M3C7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC27.39■■□□□ 1.97
SPHKAPQ2M3C7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SPHKAPQ2M3C7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
SPHKAPQ2M3C7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.97
SPHKAPQ2M3C7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 AL136038.4-201ENST00000603606 1261 ntBASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 RCC2P3-201ENST00000418112 1537 ntBASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.38■■□□□ 1.97
SPHKAPQ2M3C7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms