Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH17Q12864 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH17Q12864 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH17Q12864 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH17Q12864 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH17Q12864 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH17Q12864 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH17Q12864 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDH17Q12864 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH17Q12864 FAM201B-201ENST00000458407 597 ntBASIC19.27■□□□□ 0.68
CDH17Q12864 AP002982.1-201ENST00000492365 877 ntBASIC19.27■□□□□ 0.68
CDH17Q12864 RPPH1-201ENST00000516869 333 ntBASIC19.27■□□□□ 0.68
CDH17Q12864 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.27■□□□□ 0.68
CDH17Q12864 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.27■□□□□ 0.68
CDH17Q12864 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.27■□□□□ 0.68
CDH17Q12864 AC131212.4-201ENST00000623606 975 ntBASIC19.27■□□□□ 0.68
CDH17Q12864 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH17Q12864 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH17Q12864 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH17Q12864 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH17Q12864 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH17Q12864 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH17Q12864 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH17Q12864 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CDH17Q12864 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH17Q12864 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 AL353807.1-201ENST00000427475 662 ntBASIC19.26■□□□□ 0.67
CDH17Q12864 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.26■□□□□ 0.67
CDH17Q12864 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.26■□□□□ 0.67
CDH17Q12864 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.26■□□□□ 0.67
CDH17Q12864 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 RNF165-205ENST00000588679 2904 ntBASIC19.26■□□□□ 0.67
CDH17Q12864 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH17Q12864 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH17Q12864 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 AL138781.2-201ENST00000617896 1843 ntBASIC19.25■□□□□ 0.67
CDH17Q12864 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CDH17Q12864 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 KSR1P1-201ENST00000446298 240 ntBASIC19.25■□□□□ 0.67
CDH17Q12864 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.25■□□□□ 0.67
CDH17Q12864 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH17Q12864 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH17Q12864 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CDH17Q12864 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH17Q12864 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH17Q12864 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CDH17Q12864 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH17Q12864 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CDH17Q12864 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH17Q12864 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms