Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
DSC1Q08554 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.3■□□□□ 0.84
DSC1Q08554 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.3■□□□□ 0.84
DSC1Q08554 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
DSC1Q08554 AC036111.1-201ENST00000533973 1582 ntBASIC20.3■□□□□ 0.84
DSC1Q08554 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
DSC1Q08554 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
DSC1Q08554 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.3■□□□□ 0.84
DSC1Q08554 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.3■□□□□ 0.84
DSC1Q08554 ZNF444P1-201ENST00000559497 298 ntBASIC20.3■□□□□ 0.84
DSC1Q08554 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.3■□□□□ 0.84
DSC1Q08554 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.3■□□□□ 0.84
DSC1Q08554 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DSC1Q08554 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.3■□□□□ 0.84
DSC1Q08554 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.3■□□□□ 0.84
DSC1Q08554 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.29■□□□□ 0.84
DSC1Q08554 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
DSC1Q08554 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.29■□□□□ 0.84
DSC1Q08554 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.29■□□□□ 0.84
DSC1Q08554 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 SPDYE13P-201ENST00000445314 798 ntBASIC20.29■□□□□ 0.84
DSC1Q08554 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.29■□□□□ 0.84
DSC1Q08554 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.29■□□□□ 0.84
DSC1Q08554 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.29■□□□□ 0.84
DSC1Q08554 MIR3180-5-201ENST00000583743 153 ntBASIC20.29■□□□□ 0.84
DSC1Q08554 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.29■□□□□ 0.84
DSC1Q08554 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DSC1Q08554 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.29■□□□□ 0.84
DSC1Q08554 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DSC1Q08554 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.28■□□□□ 0.84
DSC1Q08554 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.28■□□□□ 0.84
DSC1Q08554 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
DSC1Q08554 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 MCCD1P1-208ENST00000445732 328 ntBASIC20.28■□□□□ 0.84
DSC1Q08554 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.28■□□□□ 0.84
DSC1Q08554 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.28■□□□□ 0.84
DSC1Q08554 VENTXP5-201ENST00000523979 775 ntBASIC20.28■□□□□ 0.84
DSC1Q08554 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
DSC1Q08554 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.28■□□□□ 0.84
DSC1Q08554 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.28■□□□□ 0.84
DSC1Q08554 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.28■□□□□ 0.84
DSC1Q08554 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.28■□□□□ 0.84
DSC1Q08554 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.28■□□□□ 0.84
DSC1Q08554 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DSC1Q08554 LINC01311-201ENST00000565162 1445 ntBASIC20.27■□□□□ 0.84
DSC1Q08554 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.27■□□□□ 0.84
DSC1Q08554 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.27■□□□□ 0.84
DSC1Q08554 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.27■□□□□ 0.84
DSC1Q08554 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.27■□□□□ 0.84
DSC1Q08554 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.27■□□□□ 0.84
DSC1Q08554 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
DSC1Q08554 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.27■□□□□ 0.84
DSC1Q08554 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DSC1Q08554 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.27■□□□□ 0.84
DSC1Q08554 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.27■□□□□ 0.84
DSC1Q08554 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
DSC1Q08554 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.27■□□□□ 0.84
DSC1Q08554 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.27■□□□□ 0.84
DSC1Q08554 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms